Appendix 1: Protein and gene annotation IDs The 19 genomes used, and their pldA EMBL IDs, along with their expected Helicobacter pylori biogeographic traits are listed below: · European traits: HPAG1, Lithuania75, P12, 52, 26695, SJM180, India7 [NCBI NC_008086.1, CP002334.1, NC_011498.1, CP001680.1, NC_000915.1, NC_014560.1, CP002331.1]; · African traits: J99, 2017, 2018, 908 and
SouthAfrica7 [NCBI NC_000921.1, CP002571.1, CP002572.1, CP002184.1, CP002336.1, CP002337.1, ];East Asian traits: F16, F30, 35A, PeCan4, Shi470, 83 and Sat464 [NCBI AP011940.1, AP011941.1, CP002096.1, CP002074.1, NC_010698.2, CP002605.1, CP002071.1]. Genes that coded for truncated proteins (pldA OFF) were not included in this study. The 169 AtpA sequences used in the HGT Erastin solubility dmso analysis AtpA [NCBI: EHB93466.1, EEB65020.1, EGK01617.1, EAZ96951.1, EIA10014.1, EHO10730.1, EHQ42656.1, EAS72787.1, AAZ48838.1, ACV28038.1, EGK08739.1, EEG10159.1, EDM84731.1, EGC64000.1, AAZ98752.1, ACN14443.1, EAT15601.1, ADW17434.1, ACD96878.1, EFU68802.1, ADG93995.1, BAK73949.1, EDZ61621.1, EIB16597.1, EAT97454.1, EAU01020.1, selleck chemical ABK81906.1, EEV18591.1,
ABS52242.1, ADN90332.1, EET80348.1, EHL90702.1, EFU71262.1, CAJ99396.1, EEO22948.1, CCF80240.1, EFR48376.1, EFR47618.1, CBY83548.1, AAP77024.1, EEQ62944.1, AAD08176.1, EFX42435.1, EEO26643.1, ABB44682.1, ACZ11550.1, ADR33423.1, CAE09651.1, CAL18176.1, EAW26695.1, AEB00215.1, EEY85631.1, EDX91133.1, CAQ80745.1, AEF05917.1, EAR22945.1, EHD23759.1, AAO91433.1, EHL85304.1, ACQ68874.1, YP_001451687.1, AAZ26667.1, CBG90709.1, ABE60630.1, ABU79194.1, ADN00765.1, CBJ48151.1, AEN67142.1, EDS93360.1, EFV38590.1, CAX62120.1, EFC54899.1, AEW75952.1, CAG77409.1, CAP78192.1, CAQ91467.1, GAB51972.1, ACR71021.1, EHQ52780.1, ABP62783.1, EFE21167.1, EGW54096.1, ADN77981.1, AEC17221.1, AEP31454.1, GAB56517.1, AEE25184.1, CBV44330.1, ABC33685.1, ACX97137.1, EHK61102.1, EGP19691.1, EAQ31531.1, AAV83453.1, EHS93248.1, AEK00623.1, EGL54277.1, ADP99760.1, EDM48519.1, ABM20945.1, EGE27602.1, EAW32658.1,
EHJ04715.1, ADZ93414.1, AEF56544.1, EBA00697.1, EAQ64801.1, ABR73359.1, EDM65164.1, EEF79996.1, EAS66680.1, EEB44391.1, ABG42796.1, EEX50537.1, EGI73341.1, ABM05406.1, GAA05763.1, AET16617.1, EEI49869.1, EAS45491.1, EEG87182.1, EFE51392.1, EFB70640.1, EFM18673.1, ADU71268.1, EIB97664.1, EAR55051.1, EDU61485.1, GAA64110.1, Immune system EAR27048.1, AEX54272.1, GAB59628.1, EAR11223.1, ABM01849.1, CCC32467.1, AEG13513.1, ABE57027.1, CAR35257.1, ABI73872.1, BAE75687.1, ABZ78836.1, ABO25710.1, EFA14838.1, ABV89552.1, ACJ31773.1, ADV56630.1, AZD0530 in vivo EIC83933.1, ABV39090.1, EGM67869.1, BAJ04308.1, ACA89149.1, EGV28007.1, EGV18064.1, EGZ46719.1, EAS75526.1, EAS62862.1, AAW87061.1, EEX40605.1, EGF42098.1, EDL54805.1, EGD19228.1, ZP_09853641.1, EEP94770.1, EEQ08006.1, EEQ18999.1, YP_654074.1, EEQ03775.1, EEQ00089.1, EHM50189.1]. The 171 OMPLA sequences used in the HGT analysis OMPLA: [NCBI EAZ99640.1, ADW17991.